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  1. Pre-makeped linkage format
    Pedigree files should be in the standard pre-makeped linkage format. Each line describes a single individual, and has the following format: <famid> <pid> <fatid> <motid> <sex> <genotype_1>... <genotype_n>

    GOLD - Pedigree File Format - University of Michigan

    csg.sph.umich.edu/abecasis/gold/docs/pedigree.html
    csg.sph.umich.edu/abecasis/gold/docs/pedigree.html
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  2. 其他用户还问了以下问题
    What is a pedigree file?
    Pedigree files are ubiquitously used within bioinformatics and genetics studies to convey critical information about relatedness, sex and affected status of study samples.

    ped_draw: pedigree drawing with ease | BMC Bioinformatics | Full Text …

    bmcbioinformatics.biomedcentral.com
    What can I do with a created pedigree?
    A created pedigree may be saved as an image or as a text file in ped format (see below). You may also obtain various information about the pedigree, including relatedness coefficients and verbal descriptions of relationships. QuickPed is powered by the pedsuite and uses kinship2 for alignment calculations.

    QuickPed - a free online pedigree creator • pedsuite - GitHub Pages

    magnusdv.github.io
    How do I create a pedigree with quickped?
    QuickPed is powered by the pedsuite and uses kinship2 for alignment calculations. The web app was built with Shiny. Creating pedigrees with QuickPed is very intuitive: Select a suitable start pedigree and modify it as needed. You may also load an existing ped file (see below).

    QuickPed - a free online pedigree creator • pedsuite - GitHub Pages

    magnusdv.github.io
    How to create a pedigree chart?
    Creating a pedigree chart according to the conventions (1) is however less simple than it may seem at first glance: male parents should be placed on the left whenever possible, children should be centred under their parents and there should not be any overlapping lines connecting parents, children or partners.

    Drawing human pedigree charts with DrawPed - Oxford Academic

    academic.oup.com
    What software should I use to draw a pedigree?
    Depending on the use case, we recommend to either use graph drawing applications, pedigree software that allows to move persons (e.g. HaploPainter, which is however not web-based), or even classical drawing tools. A detailed list of limitations along with suggestions to circumvent these is given in the documentation and the FAQs on our website.

    Drawing human pedigree charts with DrawPed - Oxford Academic

    academic.oup.com
    What happens if I Forget to provide a pedigree file?
    Note that some of the tools that take pedigree information do so optionally, which means that if you forget to provide the pedigree file, the tool will run successfully but pedigree-related annotations will not be produced. The PED files used as input for GATK tools are based on PLINK pedigree files. The general description can be found here.

    PED - Pedigree format – GATK

    gatk.broadinstitute.org
    反馈
  3. broadinstitute.org
    https://gatk.broadinstitute.org/hc/en-us/articles/360035531972

    PED - Pedigree format - GATK

  4. FamilySearch
    https://www.familysearch.org/en/wiki/Pedigree_Resource_File

    Pedigree Resource File - FamilySearch

  6. magnusdv.github.io
    https://magnusdv.github.io/pedsuite/articles/web_only/quickped.html

    QuickPed - a free online pedigree creator • pedsuite - GitHub Pages

    标记:
    Ped in Pedigree
    Affection Status Pedigree
    Pedigree Creator
  7. Github
    https://github.com/phenotips/open-pedi…

    GitHub - phenotips/open-pedigree: A free and open …

    A free and open-source pedigree tool powered by PhenoTips®. Open Pedigree is a robust browser-based genomic pedigree drawing solution using Prototype, Raphaël, and PhenoTips.

  8. BMC Bioinformatics
    https://bmcbioinformatics.biomedcentral.com/...

    ped_draw: pedigree drawing with ease - BMC Bioinformatics

    标记:
    Matt Velinder, Dillon Lee, Gabor Marth
    Publish Year:2020
  9. National Center for Biotechnology Information
    https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9175388

    QuickPed: an online tool for drawing pedigrees and analysing ...

    标记:
    Ped in Pedigree
    Magnus D. Vigeland
    BMC Bioinformatics. 2022; 23: 220.
  10. Oxford Academic
    https://academic.oup.com/nar/article/52/W1/W61/7668056

    Drawing human pedigree charts with DrawPed - Oxford Academic

  11. The GeneCascade
    https://www.genecascade.org/DrawPed/documentation.html

    DrawPed - Documentation

  12. Github
    https://github.com/.../Pedigree___PED_files.md

    gatk-docs/gatk3-dictionary/Pedigree___PED_files.md at master ...

  13. Github
    https://github.com/magnusdv/quickped

    GitHub - magnusdv/quickped: An online pedigree tool …

    An online pedigree tool for research applications. Build pedigrees interactively and store as images or text files in ped format. QuickPed also computes a variety of relatedness coefficients and of...

    标记:
    Ped in Pedigree
    Pairwise comparison