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  1. Nature
    https://www.nature.com › articles

    Genomic insights of body plan transitions from bilateral to …

    • Animal care and experimental procedures and were conducted in strict accordance with guidelines approved by the Animal Experiments Committee of University of Tokyo (approval ID: 14–03, 16–2). All eff… 展开

    DNA Extraction, Library Construction, and Genome Sequencing

    Lytechinus variegatus: Genomic DNA was extracted from sperms from a single male. We fi… 展开

    Nature
    K-mer-based Estimation of Genome Sizes

    We first compared the performances in genome size estimation by K-mer frequency method and GenomeScope. The genome size of green sea urchin estimated by GenomeScop… 展开

    Nature
    Raw Read Filtering and Error Correction of Short-Read Libraries

    HiSeq raw reads with the following features were regarded as low-quality reads and were filtered out: Reads containing >10 bp adapter sequences; Reads in the small insert libraries (r… 展开

    Nature
    Genome Assembly

    Genome sequences with the filtered and/or corrected data were assembled by Platanus software. The assembly was carried out using the following steps: (a) Contig constructi… 展开

    Nature
    Assessment of Assembled Genomes

    The completeness of the feather star and green sea urchin assemblies was assessed by the BUSCO program (version 2.0), using the eukaryotic and metazoan libraries (Supplementary … 展开

    Nature
    Is echinoderm pentaradial symmetry related to ancestral bilateral symmetry?
    RNA tomography and in situ hybridization in echinoderms suggest a new ambulacral-anterior model to relate echinoderm pentaradial symmetry to the ancestral bilateral symmetry.
    nature.com
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    目录
    DNA Extraction, Library Construction, and Genome Sequencing
    K-mer-based Estimation of Genome Sizes
    Raw Read Filtering and Error Correction of Short-Read Libraries
    Genome Assembly
    Assessment of Assembled Genomes
    Is echinoderm pentaradial symmetry related to ancestral bilateral symmetry?
     
  1. bilateral to pentameral transition 的研究
    PubMed
    Genomic insights of body plan transitions from bilateral to pentameral symmetry in Echinoderms
    Echinoderms are an exceptional group of bilaterians that develop pentameral adult symmetry from a bilaterally symmetric larva. However, the genetic basis in evolution and development of this unique transformation remains to be clarified. Here we report newly sequenced genomes, developmental transcri...
    作者: Yongxin Li
    已发布: 2020/07/10
    Keywords: National In…
    PubMed
    Nodal and BMP expression during the transition to pentamery in the sea urchin Heliocidaris erythrogramma: insights into patterning the enigmatic echinoderm body plan
    Background: The molecular mechanisms underlying the development of the unusual echinoderm pentameral body plan and their likeness to mechanisms underlying the development of the bilateral plans of other deuterostomes are of interest in tracing body plan evolution. In this first study of the spatial ...
    作者: Demian Koop
    已发布: 2017/02/13
    Keywords: The molec…
    National Center for Biotechnology Information
    Genomic insights of body plan transitions from bilateral to pentameral symmetry in Echinoderms
    Bilateral symmetry is highly conserved throughout animal evolution. Echinoderms, a group closely related to chordates, are exceptional in this regard, developing pentameral symmetry as adults from bilaterally symmetric larvae. Even sea cucumbers, which show worm-like bilateral structures as adults, ...
    作者: Yongxin Li, Akihit…
    已发布: 2020
    Publication: Commun …
    ResearchGate
    Genomic insights of body plan transitions from bilateral to pentameral symmetry in Echinoderms
    Echinoderms are an exceptional group of bilaterians that develop pentameral adult symmetry from a bilaterally symmetric larva. However, the genetic basis in evolution and development of this unique transformation remains to be clarified. Here we report newly sequenced genomes, developmental transcri...
    作者: Yongxin Li, Akihit…
    已发布: 2020/07/10
    DOI: 10.1038/s42003-0…
  2. PubMed
    https://pubmed.ncbi.nlm.nih.gov

    Genomic insights of body plan transitions from bilateral to …

  3. Nature
    https://www.nature.com › articles

    Molecular evidence of anteroposterior patterning in adult ... - Nature

  4. Semantic Scholar
    https://www.semanticscholar.org › paper › Genomic...

    Genomic insights of body plan transitions from bilateral to …

  5. Nature
    https://www.nature.com › articles
    [PDF]

    Genomic insights of body plan transitions from bilateral to …

  6. BMC Developmental Biology
    https://bmcdevbiol.biomedcentral.com › …

    Nodal and BMP expression during the transition to …

    2017年2月13日 · In this first study of the genes associated with Nodal and BMP2/4 signalling during the transition to pentamery in sea urchins, we show that putative targets of Nodal and BMP2/4 are expressed in the pentameral …

  7. Europe PMC
    https://europepmc.org › abstract › MED

    Genomic insights of body plan transitions from bilateral to …

  8. PubMed
    https://pubmed.ncbi.nlm.nih.gov

    Nodal and BMP expression during the transition to pentamery in …

  9. National Center for Biotechnology Information
    https://www.ncbi.nlm.nih.gov › pmc › articles

    Genomic insights of body plan transitions from bilateral to …

  10. OpenBU
    https://open.bu.edu › handle

    Genomic insights of body plan transitions from bilateral to …